- PhD, North Carolina State University
- Associate Professor, Biochemistry and Molecular Genetics
- Phone: 434-243-2785
- Email: yw4b@Virginia.EDU
Genome instability in human disease
Our research focus is to understand the structure and function of unusual DNA sequences in living cells, and how these sequences cause genome instability and lead to human diseases. Human chromosomal fragile sites have been correlated with the chromosomal deletions and gene rearrangements found in many cancers.
Our studies are aimed at understanding the genesis of breakpoints that occur at or near fragile sites during oncogenesis. Ongoing projects include examining the chromatin structure of cancer-specific fragile sites, and their involvement in DNA replication/cell cycle checkpoints, and investigating the mechanism of RET/PTC rearrangement. We are also interested in the nature of trinucleotide repeat expansion diseases, in which an expanded trinucleotide repeat block is present in a gene for which loss or alteration leads to the disease. Our effort is to examine the role of chromatin structure in the pathology of these diseases, and to investigate the role of DNA structure in the mechanism of the repeat expansion.
Trainees in my laboratory will gain knowledge about chromatin biology, DNA repair, and cancer-causing gene rearrangements, and will develop expertise in cell culture, molecular biology techniques for proteins and nucleic acids, cytogenetic analysis, and electron microscopy.
- Trojer P, Li G, Sims R, Vaquero A, Kalakonda N, Boccuni P, Lee D, Erdjument-Bromage H, Tempst P, Nimer S, Wang Y, Reinberg D. L3MBTL1, a histone-methylation-dependent chromatin lock. Cell. 2007;129(5): 915-28. PMID: 17540172
- Chromatin structure of repeating CTG/CAG and CGG/CCG sequences in human disease. Frontiers in bioscience : a journal and virtual library. 2007;12 4731-41. PMID: 17485409
- Ruan H, Wang Y. Friedreich's ataxia GAA.TTC duplex and GAA.GAA.TTC triplex structures exclude nucleosome assembly. Journal of molecular biology. 2008;383(2): 292-300. PMID: 18775729
- Burrow A, Williams L, Pierce L, Wang Y. Over half of breakpoints in gene pairs involved in cancer-specific recurrent translocations are mapped to human chromosomal fragile sites. BMC genomics. 2009;10 59. PMID: 19183484
- Hagerman K, Ruan H, Edamura K, Matsuura T, Pearson C, Wang Y. The ATTCT repeats of spinocerebellar ataxia type 10 display strong nucleosome assembly which is enhanced by repeat interruptions. Gene. 2009;434(1): 29-34. PMID: 19171184
- Gandhi M, Dillon L, Pramanik S, Nikiforov Y, Wang Y. DNA breaks at fragile sites generate oncogenic RET/PTC rearrangements in human thyroid cells. Oncogene. 2010;29(15): 2272-80. PMID: 20101222
- Li G, Margueron R, Hu G, Stokes D, Wang Y, Reinberg D. Highly compacted chromatin formed in vitro reflects the dynamics of transcription activation in vivo. Molecular cell. 2010;38(1): 41-53. PMID: 20385088
- Burrow A, Marullo A, Holder L, Wang Y. Secondary structure formation and DNA instability at fragile site FRA16B. Nucleic acids research. 2010;38(9): 2865-77. PMID: 20071743
- Wan C, Kulkarni A, Wang Y. ATR preferentially interacts with common fragile site FRA3B and the binding requires its kinase activity in response to aphidicolin treatment. Mutation research. 2010;686(1): 39-46. PMID: 20060399
- Dillon L, Burrow A, Wang Y. DNA instability at chromosomal fragile sites in cancer. Current genomics. 2011;11(5): 326-37. PMID: 21286310
- Weckerle A, Santra M, Ng M, Koty P, Wang Y. CBFB and MYH11 in inv(16)(p13q22) of acute myeloid leukemia displaying close spatial proximity in interphase nuclei of human hematopoietic stem cells. Genes, chromosomes & cancer. 2011;50(9): 746-55. PMID: 21638519
- Dillon L, Lehman C, Wang Y. The role of fragile sites in sporadic papillary thyroid carcinoma. Journal of thyroid research. 2012;2012 927683. PMID: 22762011
- Dillon L, Pierce L, Lehman C, Nikiforov Y, Wang Y. DNA topoisomerases participate in fragility of the oncogene RET. PloS one. 2013;8(9): e75741. PMID: 24040417
- Dillon L, Pierce L, Ng M, Wang Y. Role of DNA secondary structures in fragile site breakage along human chromosome 10. Human molecular genetics. 2013;22(7): 1443-56. PMID: 23297364
- Axford M, Wang Y, Nakamori M, Zannis-Hadjopoulos M, Thornton C, Pearson C. Detection of Slipped-DNAs at the Trinucleotide Repeats of the Myotonic Dystrophy Type I Disease Locus in Patient Tissues. PLoS genetics. 2013;9(12): e1003866. PMID: 24367268